Work using BrainGlobe's tools

A brief collection of scientific articles and other works using tools from BrainGlobe.
Title
Year
Uses
​A multimodal cell census and atlas of the mammalian primary motor cortex​
2020
brainrender
​Visual intracortical and transthalamic pathways carry distinct information to cortical areas​
2020
cellfinder
​A deep learning algorithm for 3D cell detection in whole mouse brain image datasets​
2021
brainrender
​The retrosplenial cortex combines internal and external cues to encode head velocity during navigation​
2021
cellfinder
​Dendritic domain-specific sampling of long-range axons shape feedforward and feedback connectivity of L5 neurons​
2021
cellfinder
​Constructing an adult orofacial premotor atlas in Allen Mouse CCF​
2021
brainrender
​Analysis of segmentation ontology reveals similarities and differences in connectivity onto L2/3 neurons in mouse V1​
2021
cellfinder
​Control of parallel hippocampal output pathways by amygdalar long-range inhibition​
2021
brainrender
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Title	Year	Uses
A multimodal cell census and atlas of the mammalian primary motor cortex	2020	brainrender
Visual intracortical and transthalamic pathways carry distinct information to cortical areas	2020	cellfinder
A deep learning algorithm for 3D cell detection in whole mouse brain image datasets	2021	brainrender
The retrosplenial cortex combines internal and external cues to encode head velocity during navigation	2021	cellfinder
Dendritic domain-specific sampling of long-range axons shape feedforward and feedback connectivity of L5 neurons	2021	cellfinder
Constructing an adult orofacial premotor atlas in Allen Mouse CCF	2021	brainrender
Analysis of segmentation ontology reveals similarities and differences in connectivity onto L2/3 neurons in mouse V1	2021	cellfinder
Control of parallel hippocampal output pathways by amygdalar long-range inhibition	2021	brainrender