brainglobe
brainglobe
About
bg-atlasapi
BG-AtlasAPI
Usage
Contributing
API documentation
BrainGlobe's publications
Work using BrainGlobe's tools
cellfinder
Introduction
Installation
User guide
Tutorial
Troubleshooting
Using conda
Image definition
Getting in touch
Contributing to cellfinder
Release notes
Citing cellfinder
Using cellfinder at the SWC
brainreg
Introduction
Installation
User guide
Tutorial
Visualisation
brainreg-segment
Introduction
User guide
Applications
bg-space
BG-Space
Usage
morphapi
Morphapi
Usage
Brainrender
Brainrender
Governance model
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BrainGlobe's publications

Publications describing software from the BrainGlobe Suite

BrainGlobe Atlas API: a common interface for neuroanatomical atlases

Link: 10.21105/joss.02668​

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Brainrender.A python based software for visualisation of neuroanatomical and morphological data.

Link: https://doi.org/10.1101/2020.02.23.961748​

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A deep learning algorithm for 3D cell detection in whole mouse brain image datasets

link: https://doi.org/10.1101/2020.10.21.348771​

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Work using BrainGlobe's tools
Last updated 2 months ago
Contents
BrainGlobe Atlas API: a common interface for neuroanatomical atlases
Brainrender.A python based software for visualisation of neuroanatomical and morphological data.
A deep learning algorithm for 3D cell detection in whole mouse brain image datasets