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bg-atlasapi
cellfinder
cellfinder-core
cellfinder-napari
BRAINREG-NAPARI
brainreg-segment
Brainrender
config
Contents
write_default_config [#19]
write_default_config [#19]1
def write_default_config(path=CONFIG_PATH,
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template=TEMPLATE_CONF_DICT):
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docstring:
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Write configuration file at first repo usage. In this way,
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we don't need to keep a confusing template config file in the repo.
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Parameters
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----------
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path : Path object
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Path of the config file (optional).
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template : dict
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Template of the config file to be written (optional).
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read_config [#40]
read_config [#40]1
def read_config(path=CONFIG_PATH):
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docstring:
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Read BrainGlobe config.
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Parameters
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----------
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path : Path object
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Path of the config file (optional).
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Returns
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-------
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ConfigParser object
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brainglobe configuration
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write_config_value [#64]
write_config_value [#64]1
def write_config_value(key, val, path=CONFIG_PATH):
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docstring:
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Write a new value in the config file. To make things simple, ignore
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sections and look directly for matching parameters names.
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Parameters
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----------
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key : str
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Name of the parameter to configure.
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val :
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New value.
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path : Path object
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Path of the config file (optional).
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get_brainglobe_dir [#88]
get_brainglobe_dir [#88]1
def get_brainglobe_dir():
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docstring:
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Return brainglobe default directory.
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Returns
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-------
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Path object
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default BrainGlobe directory with atlases
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cli_modify_config [#100]
cli_modify_config [#100]1
def cli_modify_config(key=0, value=0, show=False):
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docstring:
no docstring
_print_config [#117]
_print_config [#117]1
def _print_config():
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docstring:
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Print configuration.
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Last modified 1yr ago